Protein–RNA interactions for Protein: A0A087WR49

Scgb2b11, ABPBG11, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b11A0A087WR49 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scgb2b11A0A087WR49 Notumos-201ENSMUST00000151998 2659 ntBASIC22.7■■□□□ 1.22
Scgb2b11A0A087WR49 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Scgb2b11A0A087WR49 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scgb2b11A0A087WR49 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scgb2b11A0A087WR49 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scgb2b11A0A087WR49 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scgb2b11A0A087WR49 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Scgb2b11A0A087WR49 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scgb2b11A0A087WR49 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Scgb2b11A0A087WR49 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scgb2b11A0A087WR49 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scgb2b11A0A087WR49 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.65■■□□□ 1.22
Scgb2b11A0A087WR49 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scgb2b11A0A087WR49 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.65■■□□□ 1.22
Scgb2b11A0A087WR49 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scgb2b11A0A087WR49 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scgb2b11A0A087WR49 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scgb2b11A0A087WR49 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scgb2b11A0A087WR49 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Scgb2b11A0A087WR49 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Scgb2b11A0A087WR49 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scgb2b11A0A087WR49 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.63■■□□□ 1.21
Scgb2b11A0A087WR49 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scgb2b11A0A087WR49 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scgb2b11A0A087WR49 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scgb2b11A0A087WR49 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scgb2b11A0A087WR49 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.62■■□□□ 1.21
Scgb2b11A0A087WR49 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scgb2b11A0A087WR49 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scgb2b11A0A087WR49 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scgb2b11A0A087WR49 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Scgb2b11A0A087WR49 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scgb2b11A0A087WR49 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scgb2b11A0A087WR49 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scgb2b11A0A087WR49 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scgb2b11A0A087WR49 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scgb2b11A0A087WR49 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scgb2b11A0A087WR49 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scgb2b11A0A087WR49 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Scgb2b11A0A087WR49 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scgb2b11A0A087WR49 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scgb2b11A0A087WR49 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.59■■□□□ 1.21
Scgb2b11A0A087WR49 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scgb2b11A0A087WR49 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scgb2b11A0A087WR49 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.58■■□□□ 1.21
Scgb2b11A0A087WR49 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Scgb2b11A0A087WR49 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scgb2b11A0A087WR49 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scgb2b11A0A087WR49 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Scgb2b11A0A087WR49 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Scgb2b11A0A087WR49 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scgb2b11A0A087WR49 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Scgb2b11A0A087WR49 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scgb2b11A0A087WR49 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scgb2b11A0A087WR49 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scgb2b11A0A087WR49 Gm11687-201ENSMUST00000118911 886 ntBASIC22.57■■□□□ 1.2
Scgb2b11A0A087WR49 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scgb2b11A0A087WR49 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Scgb2b11A0A087WR49 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scgb2b11A0A087WR49 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scgb2b11A0A087WR49 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scgb2b11A0A087WR49 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scgb2b11A0A087WR49 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scgb2b11A0A087WR49 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scgb2b11A0A087WR49 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scgb2b11A0A087WR49 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scgb2b11A0A087WR49 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scgb2b11A0A087WR49 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms