Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.49□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.49□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.48□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-4-dv7A0A075B6C2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gm44428-201ENSMUST00000204474 874 ntBASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gm6311-201ENSMUST00000073790 878 ntBASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms