Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-5A0A075B6B9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Trav6d-5A0A075B6B9 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.09■□□□□ 0.33
Trav6d-5A0A075B6B9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6d-5A0A075B6B9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6d-5A0A075B6B9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6d-5A0A075B6B9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6d-5A0A075B6B9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6d-5A0A075B6B9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.08■□□□□ 0.33
Trav6d-5A0A075B6B9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6d-5A0A075B6B9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6d-5A0A075B6B9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav6d-5A0A075B6B9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav6d-5A0A075B6B9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-5A0A075B6B9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-5A0A075B6B9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-5A0A075B6B9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-5A0A075B6B9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6d-5A0A075B6B9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-5A0A075B6B9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav6d-5A0A075B6B9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav6d-5A0A075B6B9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-5A0A075B6B9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms