Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Mir6538-201ENSMUST00000183713 110 ntBASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Gm16437-201ENSMUST00000025669 507 ntBASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6n-6A0A075B6B2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6n-6A0A075B6B2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6n-6A0A075B6B2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6n-6A0A075B6B2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6n-6A0A075B6B2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6n-6A0A075B6B2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6n-6A0A075B6B2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav6n-6A0A075B6B2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6n-6A0A075B6B2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6n-6A0A075B6B2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-6A0A075B6B2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-6A0A075B6B2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-6A0A075B6B2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms