Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6n-7A0A075B6A6 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6n-7A0A075B6A6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6n-7A0A075B6A6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav6n-7A0A075B6A6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav6n-7A0A075B6A6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.95■□□□□ 0.46
Trav6n-7A0A075B6A6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6n-7A0A075B6A6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6n-7A0A075B6A6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm5812-201ENSMUST00000061073 957 ntBASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6n-7A0A075B6A6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Gm10232-201ENSMUST00000089221 720 ntBASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6n-7A0A075B6A6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6n-7A0A075B6A6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6n-7A0A075B6A6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6n-7A0A075B6A6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6n-7A0A075B6A6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trav6n-7A0A075B6A6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.89■□□□□ 0.46
Trav6n-7A0A075B6A6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6n-7A0A075B6A6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6n-7A0A075B6A6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav6n-7A0A075B6A6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6n-7A0A075B6A6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav6n-7A0A075B6A6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6n-7A0A075B6A6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms