Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-3A0A075B6A4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-3A0A075B6A4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav12d-3A0A075B6A4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav12d-3A0A075B6A4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-3A0A075B6A4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-3A0A075B6A4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trav12d-3A0A075B6A4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav12d-3A0A075B6A4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav12d-3A0A075B6A4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav12d-3A0A075B6A4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-3A0A075B6A4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-3A0A075B6A4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-3A0A075B6A4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-3A0A075B6A4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-3A0A075B6A4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-3A0A075B6A4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-3A0A075B6A4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-3A0A075B6A4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-3A0A075B6A4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Trav12d-3A0A075B6A4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-3A0A075B6A4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12d-3A0A075B6A4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trav12d-3A0A075B6A4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav12d-3A0A075B6A4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav12d-3A0A075B6A4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12d-3A0A075B6A4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-3A0A075B6A4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Gm8109-201ENSMUST00000194076 746 ntBASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav12d-3A0A075B6A4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms