Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-1A0A075B644 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trav13-1A0A075B644 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-1A0A075B644 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13-1A0A075B644 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13-1A0A075B644 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Trav13-1A0A075B644 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-1A0A075B644 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-1A0A075B644 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-1A0A075B644 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav13-1A0A075B644 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-1A0A075B644 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-1A0A075B644 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-1A0A075B644 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Gm14117-201ENSMUST00000122417 843 ntBASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav13-1A0A075B644 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-1A0A075B644 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Gm9959-201ENSMUST00000068277 390 ntBASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-1A0A075B644 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Etf1-202ENSMUST00000180351 108 ntBASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Gm45102-201ENSMUST00000207427 857 ntBASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-1A0A075B644 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms