Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Gm24447-201ENSMUST00000083977 338 ntBASIC10.4□□□□□ -0.74
Gm12728V9GX31 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm12728V9GX31 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Gm12728V9GX31 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.39□□□□□ -0.75
Gm12728V9GX31 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.39□□□□□ -0.75
Gm12728V9GX31 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.39□□□□□ -0.75
Gm12728V9GX31 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.39□□□□□ -0.75
Gm12728V9GX31 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.39□□□□□ -0.75
Gm12728V9GX31 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12728V9GX31 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12728V9GX31 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.38□□□□□ -0.75
Gm12728V9GX31 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12728V9GX31 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms