Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cx3cr1Q9Z0D9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm4995-201ENSMUST00000117247 432 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm5312-201ENSMUST00000203728 547 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cx3cr1Q9Z0D9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Paupar-201ENSMUST00000194826 3482 ntBASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Cx3cr1Q9Z0D9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms