Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Gm5356-201ENSMUST00000093326 615 ntBASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClcnkaQ9WUB7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm14350-201ENSMUST00000116642 640 ntBASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm13612-201ENSMUST00000119276 390 ntBASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm9002-201ENSMUST00000178437 499 ntBASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm7653-201ENSMUST00000214567 508 ntBASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClcnkaQ9WUB7 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm15806-201ENSMUST00000120696 955 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm6244-201ENSMUST00000178732 841 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm19931-201ENSMUST00000198920 368 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm16372-201ENSMUST00000073088 450 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms