Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm23931-201ENSMUST00000103842 109 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm6222-202ENSMUST00000182143 629 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Snora78-201ENSMUST00000158630 128 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm27514-201ENSMUST00000183692 110 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm38092-201ENSMUST00000195600 653 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm18062-201ENSMUST00000208020 547 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm18055-201ENSMUST00000208254 547 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3aQ9JKX8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms