Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm23949-201ENSMUST00000104027 127 ntBASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-4Q9EQM3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Gm15515-201ENSMUST00000117827 822 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms