Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmg20aQ9DC33 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Mir698-201ENSMUST00000102164 109 ntBASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Gm2810-201ENSMUST00000118681 990 ntBASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Gm18206-201ENSMUST00000207027 926 ntBASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Gm45841-201ENSMUST00000207700 164 ntBASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmg20aQ9DC33 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.79□□□□□ -0.52
Hmg20aQ9DC33 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms