Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Gm19931-201ENSMUST00000198920 368 ntBASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Gm25857-201ENSMUST00000082788 129 ntBASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2aQ9DB34 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2aQ9DB34 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm29127-201ENSMUST00000188304 517 ntBASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm28693-202ENSMUST00000190758 331 ntBASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm37497-201ENSMUST00000195830 798 ntBASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2aQ9DB34 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms