Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sh2d4aQ9D7V1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh2d4aQ9D7V1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Matn2-203ENSMUST00000226766 3252 ntBASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d4aQ9D7V1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Gm12485-201ENSMUST00000119641 291 ntBASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Gm13616-201ENSMUST00000120600 222 ntBASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh2d4aQ9D7V1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms