Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp5Q9D7S9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Chmp5Q9D7S9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chmp5Q9D7S9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Gm18263-201ENSMUST00000220846 1928 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Gm11978-201ENSMUST00000122315 466 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Gm27838-201ENSMUST00000184829 128 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Gm37935-201ENSMUST00000192012 982 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Chmp5Q9D7S9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chmp5Q9D7S9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms