Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Gm4768-201ENSMUST00000206199 686 ntBASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Gm19163-201ENSMUST00000223313 780 ntBASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm14127-201ENSMUST00000117906 678 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm18062-201ENSMUST00000208020 547 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm18055-201ENSMUST00000208254 547 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tmem54Q9D7S1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm12363-201ENSMUST00000122250 668 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Gm22121-201ENSMUST00000175148 54 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem54Q9D7S1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms