Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Gm33320-201ENSMUST00000192232 530 ntBASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Gm18195-201ENSMUST00000207604 706 ntBASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3a3Q9D554 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.08□□□□□ -0.31
Sf3a3Q9D554 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3a3Q9D554 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3a3Q9D554 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3a3Q9D554 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3a3Q9D554 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gm25948-201ENSMUST00000175334 112 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Mir7221-201ENSMUST00000184009 72 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gm21470-201ENSMUST00000187680 696 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Gm18766-201ENSMUST00000189811 808 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Psmb5-202ENSMUST00000227257 622 ntBASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3a3Q9D554 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Gm15460-201ENSMUST00000118147 391 ntBASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Gm12260-201ENSMUST00000122447 411 ntBASIC13.07□□□□□ -0.32
Sf3a3Q9D554 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms