Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.33■□□□□ 0.05
Taf1dQ9D4V4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Gm12314-201ENSMUST00000118104 538 ntBASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Gm11246-201ENSMUST00000120880 345 ntBASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Gm43962-201ENSMUST00000203898 190 ntBASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Taf1dQ9D4V4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Gm27530-201ENSMUST00000184096 98 ntBASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1dQ9D4V4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Gm24891-201ENSMUST00000104391 136 ntBASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms