Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Gm38092-201ENSMUST00000195600 653 ntBASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Daam2-202ENSMUST00000224595 1926 ntBASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stag1Q9D3E6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Acot6-202ENSMUST00000222921 3622 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm11531-201ENSMUST00000117614 555 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm2546-201ENSMUST00000182630 991 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm31256-201ENSMUST00000194705 506 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm5950-201ENSMUST00000213337 772 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Stag1Q9D3E6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Stag1Q9D3E6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Gm16570-201ENSMUST00000161951 436 ntBASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Stag1Q9D3E6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Stag1Q9D3E6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms