Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps33aQ9D2N9 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm2810-201ENSMUST00000118681 990 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm25948-201ENSMUST00000175334 112 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm24420-201ENSMUST00000176676 59 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm42599-201ENSMUST00000201308 469 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps33aQ9D2N9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps33aQ9D2N9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms