Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Gm24513-201ENSMUST00000174964 138 ntBASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chaf1bQ9D0N7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm6888-201ENSMUST00000221983 706 ntBASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chaf1bQ9D0N7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.15□□□□□ -0.46
Chaf1bQ9D0N7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms