Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.22■□□□□ 0.03
Smc3Q9CW03 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.21■□□□□ 0.03
Smc3Q9CW03 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Gm14350-201ENSMUST00000116642 640 ntBASIC15.21■□□□□ 0.03
Smc3Q9CW03 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Gm44397-201ENSMUST00000195950 113 ntBASIC15.21■□□□□ 0.03
Smc3Q9CW03 Itm2b-204ENSMUST00000228637 783 ntBASIC15.21■□□□□ 0.03
Smc3Q9CW03 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc3Q9CW03 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smc3Q9CW03 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smc3Q9CW03 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Smc3Q9CW03 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.21■□□□□ 0.02
Smc3Q9CW03 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.2■□□□□ 0.02
Smc3Q9CW03 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.2■□□□□ 0.02
Smc3Q9CW03 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc3Q9CW03 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.19■□□□□ 0.02
Smc3Q9CW03 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.19■□□□□ 0.02
Smc3Q9CW03 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc3Q9CW03 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Gm16202-201ENSMUST00000117532 544 ntBASIC15.18■□□□□ 0.02
Smc3Q9CW03 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms