Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Gm9630-201ENSMUST00000178304 885 ntBASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Gm43799-201ENSMUST00000201845 579 ntBASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf2a1Q99PM3 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 CT868720.1-201ENSMUST00000223069 2544 ntBASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm45161-201ENSMUST00000207316 2263 ntBASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm11355-201ENSMUST00000121120 306 ntBASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf2a1Q99PM3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.1□□□□□ -0.15
Gtf2a1Q99PM3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms