Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh23Q99PF4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm3332-201ENSMUST00000189337 928 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm12516-201ENSMUST00000120819 385 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh23Q99PF4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms