Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm18041-201ENSMUST00000218210 618 ntBASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp1b1Q99LU0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp1b1Q99LU0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms