Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm13689-201ENSMUST00000119360 685 ntBASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vmp1Q99KU0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Gm5356-201ENSMUST00000093326 615 ntBASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vmp1Q99KU0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm2495-201ENSMUST00000191160 466 ntBASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm38144-201ENSMUST00000192790 465 ntBASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm44397-201ENSMUST00000195950 113 ntBASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms