Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.8□□□□□ -0.52
Lims1Q99JW4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm12341-201ENSMUST00000119724 503 ntBASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.8□□□□□ -0.52
Lims1Q99JW4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.8□□□□□ -0.52
Lims1Q99JW4 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.8□□□□□ -0.52
Lims1Q99JW4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lims1Q99JW4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm16215-201ENSMUST00000161990 637 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm44397-201ENSMUST00000195950 113 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm6983-201ENSMUST00000214912 628 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm15823-201ENSMUST00000064305 670 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm26035-201ENSMUST00000083065 308 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms