Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Matn2-203ENSMUST00000226766 3252 ntBASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thumpd1Q99J36 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm6447-201ENSMUST00000118905 835 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm11524-201ENSMUST00000119349 807 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm26464-201ENSMUST00000157094 305 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm27397-201ENSMUST00000184997 107 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm29608-201ENSMUST00000190444 463 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gm43094-201ENSMUST00000196549 921 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Chchd1-203ENSMUST00000224633 557 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.53□□□□□ -0.56
Thumpd1Q99J36 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thumpd1Q99J36 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms