Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Gm13461-201ENSMUST00000120980 662 ntBASIC14.29□□□□□ -0.12
Ctu1Q99J10 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.29□□□□□ -0.12
Ctu1Q99J10 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.29□□□□□ -0.12
Ctu1Q99J10 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.29□□□□□ -0.12
Ctu1Q99J10 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctu1Q99J10 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.29□□□□□ -0.12
Ctu1Q99J10 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctu1Q99J10 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Gm12015-201ENSMUST00000117065 843 ntBASIC14.28□□□□□ -0.12
Ctu1Q99J10 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.28□□□□□ -0.12
Ctu1Q99J10 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.28□□□□□ -0.12
Ctu1Q99J10 Gm45118-201ENSMUST00000208928 825 ntBASIC14.28□□□□□ -0.12
Ctu1Q99J10 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.28□□□□□ -0.12
Ctu1Q99J10 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Ctu1Q99J10 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ctu1Q99J10 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Gm28882-201ENSMUST00000185504 314 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 Gm32999-201ENSMUST00000192693 562 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Gm17812-201ENSMUST00000204935 318 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.27□□□□□ -0.13
Ctu1Q99J10 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctu1Q99J10 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctu1Q99J10 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctu1Q99J10 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms