Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.26■□□□□ 0.03
Col20a1Q923P0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm25668-201ENSMUST00000157700 129 ntBASIC15.25■□□□□ 0.03
Col20a1Q923P0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm2546-201ENSMUST00000182630 991 ntBASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.25■□□□□ 0.03
Col20a1Q923P0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.25■□□□□ 0.03
Col20a1Q923P0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.25■□□□□ 0.03
Col20a1Q923P0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.24■□□□□ 0.03
Col20a1Q923P0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col20a1Q923P0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.24■□□□□ 0.03
Col20a1Q923P0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col20a1Q923P0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Gm45925-201ENSMUST00000218882 744 ntBASIC15.23■□□□□ 0.03
Col20a1Q923P0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.23■□□□□ 0.03
Col20a1Q923P0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.23■□□□□ 0.03
Col20a1Q923P0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms