Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Mir1982-201ENSMUST00000157368 74 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm9396-201ENSMUST00000076703 567 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Mir339-201ENSMUST00000083659 96 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Gm23363-201ENSMUST00000175024 79 ntBASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha9Q91Y11 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm32025-201ENSMUST00000217960 307 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm5186-201ENSMUST00000218781 920 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha9Q91Y11 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms