Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Auts2-212ENSMUST00000178555 309 ntBASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb4Q91XZ6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb4Q91XZ6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb4Q91XZ6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb4Q91XZ6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb4Q91XZ6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm15371-201ENSMUST00000117057 784 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Mir6977-201ENSMUST00000184960 64 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm19931-201ENSMUST00000198920 368 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb4Q91XZ6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Gm6447-201ENSMUST00000118905 835 ntBASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Gm2423-201ENSMUST00000074863 733 ntBASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb4Q91XZ6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb4Q91XZ6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb4Q91XZ6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms