Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Pck2-205ENSMUST00000226352 2784 ntBASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga4Q91XY4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhga4Q91XY4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Gm6091-201ENSMUST00000098307 165 ntBASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhga4Q91XY4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Mir874-201ENSMUST00000104769 76 ntBASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms