Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Tram1Q91V04 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.14□□□□□ -0.63
Tram1Q91V04 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.14□□□□□ -0.63
Tram1Q91V04 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.14□□□□□ -0.63
Tram1Q91V04 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.14□□□□□ -0.63
Tram1Q91V04 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Tram1Q91V04 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.14□□□□□ -0.63
Tram1Q91V04 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tram1Q91V04 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm15240-201ENSMUST00000118156 720 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Mir1897-201ENSMUST00000122581 272 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.13□□□□□ -0.63
Tram1Q91V04 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tram1Q91V04 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.13□□□□□ -0.63
Tram1Q91V04 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tram1Q91V04 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.12□□□□□ -0.63
Tram1Q91V04 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.12□□□□□ -0.63
Tram1Q91V04 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Tram1Q91V04 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Tram1Q91V04 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.12□□□□□ -0.63
Tram1Q91V04 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Tram1Q91V04 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tram1Q91V04 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tram1Q91V04 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms