Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Q8VDP2 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Q8VDP2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Q8VDP2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.6□□□□□ -0.39
Q8VDP2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gm5682-201ENSMUST00000173402 505 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.6□□□□□ -0.39
Q8VDP2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Q8VDP2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.6□□□□□ -0.39
Q8VDP2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.6□□□□□ -0.39
Q8VDP2 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Q8VDP2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.6□□□□□ -0.39
Q8VDP2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q8VDP2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Q8VDP2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Q8VDP2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Q8VDP2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.59□□□□□ -0.39
Q8VDP2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.59□□□□□ -0.39
Q8VDP2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.59□□□□□ -0.39
Q8VDP2 Gm18165-201ENSMUST00000217426 928 ntBASIC12.59□□□□□ -0.39
Q8VDP2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.59□□□□□ -0.39
Q8VDP2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Q8VDP2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.59□□□□□ -0.39
Q8VDP2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q8VDP2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.58□□□□□ -0.39
Q8VDP2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Q8VDP2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Q8VDP2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms