Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Gm25261-201ENSMUST00000157416 134 ntBASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ndc1Q8VCB1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Gm26185-201ENSMUST00000157692 266 ntBASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms