Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Gm6152-201ENSMUST00000151704 340 ntBASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Mir6392-201ENSMUST00000184924 108 ntBASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Gm18473-201ENSMUST00000220543 868 ntBASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm1Q8VC85 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Gm2495-201ENSMUST00000191160 466 ntBASIC12.4□□□□□ -0.42
Lsm1Q8VC85 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Gm6458-201ENSMUST00000211573 635 ntBASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms