Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.2■□□□□ 0.5
Cd109Q8R422 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Cd109Q8R422 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cd109Q8R422 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC18.19■□□□□ 0.5
Cd109Q8R422 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC18.19■□□□□ 0.5
Cd109Q8R422 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cd109Q8R422 Gm5070-201ENSMUST00000177599 862 ntBASIC18.19■□□□□ 0.5
Cd109Q8R422 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC18.19■□□□□ 0.5
Cd109Q8R422 Gm32999-201ENSMUST00000192693 562 ntBASIC18.19■□□□□ 0.5
Cd109Q8R422 Gm19994-201ENSMUST00000217086 586 ntBASIC18.19■□□□□ 0.5
Cd109Q8R422 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cd109Q8R422 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.19■□□□□ 0.5
Cd109Q8R422 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.19■□□□□ 0.5
Cd109Q8R422 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd109Q8R422 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cd109Q8R422 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC18.18■□□□□ 0.5
Cd109Q8R422 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC18.18■□□□□ 0.5
Cd109Q8R422 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cd109Q8R422 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cd109Q8R422 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd109Q8R422 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC18.17■□□□□ 0.5
Cd109Q8R422 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Cd109Q8R422 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.17■□□□□ 0.5
Cd109Q8R422 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cd109Q8R422 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC18.17■□□□□ 0.5
Cd109Q8R422 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.17■□□□□ 0.5
Cd109Q8R422 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd109Q8R422 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cd109Q8R422 Rmrp-201ENSMUST00000157463 271 ntBASIC18.16■□□□□ 0.5
Cd109Q8R422 Gm45433-201ENSMUST00000209386 247 ntBASIC18.16■□□□□ 0.5
Cd109Q8R422 AC163667.3-201ENSMUST00000225774 222 ntBASIC18.16■□□□□ 0.5
Cd109Q8R422 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.16■□□□□ 0.5
Cd109Q8R422 AL732506.1-201ENSMUST00000226420 281 ntBASIC18.16■□□□□ 0.5
Cd109Q8R422 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC18.16■□□□□ 0.5
Cd109Q8R422 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.16■□□□□ 0.5
Cd109Q8R422 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd109Q8R422 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Cd109Q8R422 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cd109Q8R422 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd109Q8R422 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd109Q8R422 Gm8617-201ENSMUST00000118796 2222 ntBASIC18.16■□□□□ 0.5
Cd109Q8R422 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Gm16481-201ENSMUST00000119074 1227 ntBASIC18.15■□□□□ 0.5
Cd109Q8R422 Gm9083-201ENSMUST00000120423 819 ntBASIC18.15■□□□□ 0.5
Cd109Q8R422 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC18.15■□□□□ 0.5
Cd109Q8R422 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Gm17812-201ENSMUST00000204935 318 ntBASIC18.15■□□□□ 0.5
Cd109Q8R422 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms