Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afjQ8R1M2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afjQ8R1M2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afjQ8R1M2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms