Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Gm6091-201ENSMUST00000098307 165 ntBASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfwd3Q8CIK8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms