Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.06□□□□□ -0.32
Clip4Q8CI96 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clip4Q8CI96 Matn2-203ENSMUST00000226766 3252 ntBASIC13.05□□□□□ -0.32
Clip4Q8CI96 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Gm29608-201ENSMUST00000190444 463 ntBASIC13.04□□□□□ -0.32
Clip4Q8CI96 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.04□□□□□ -0.32
Clip4Q8CI96 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clip4Q8CI96 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clip4Q8CI96 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clip4Q8CI96 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.03□□□□□ -0.32
Clip4Q8CI96 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clip4Q8CI96 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.03□□□□□ -0.32
Clip4Q8CI96 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clip4Q8CI96 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clip4Q8CI96 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.03□□□□□ -0.32
Clip4Q8CI96 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms