Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ShfQ8CG80 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ShfQ8CG80 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ShfQ8CG80 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.54□□□□□ -0.56
ShfQ8CG80 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Mir7654-201ENSMUST00000185082 70 ntBASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm28631-201ENSMUST00000190740 334 ntBASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm20949-201ENSMUST00000206478 952 ntBASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.54□□□□□ -0.56
ShfQ8CG80 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm16372-201ENSMUST00000073088 450 ntBASIC11.54□□□□□ -0.56
ShfQ8CG80 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.54□□□□□ -0.56
ShfQ8CG80 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
ShfQ8CG80 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ShfQ8CG80 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.53□□□□□ -0.56
ShfQ8CG80 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.53□□□□□ -0.56
ShfQ8CG80 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Gm15920-201ENSMUST00000118998 402 ntBASIC11.53□□□□□ -0.56
ShfQ8CG80 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.53□□□□□ -0.56
ShfQ8CG80 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.53□□□□□ -0.56
ShfQ8CG80 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Gm18473-201ENSMUST00000220543 868 ntBASIC11.53□□□□□ -0.56
ShfQ8CG80 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.53□□□□□ -0.56
ShfQ8CG80 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ShfQ8CG80 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ShfQ8CG80 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ShfQ8CG80 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ShfQ8CG80 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
ShfQ8CG80 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ShfQ8CG80 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ShfQ8CG80 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms