Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm24830-201ENSMUST00000102024 166 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm13492-201ENSMUST00000119772 665 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm25890-201ENSMUST00000177643 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm22614-201ENSMUST00000178300 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Mir7221-201ENSMUST00000184009 72 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm22042-201ENSMUST00000082989 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm26232-201ENSMUST00000083360 166 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm24136-201ENSMUST00000083374 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gm26110-201ENSMUST00000083971 165 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.63□□□□□ -0.39
Rab43Q8CG50 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm12997-201ENSMUST00000120207 640 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm19931-201ENSMUST00000198920 368 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab43Q8CG50 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.62□□□□□ -0.39
Rab43Q8CG50 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms