Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm11524-201ENSMUST00000119349 807 ntBASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm13616-201ENSMUST00000120600 222 ntBASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.61□□□□□ -0.55
Lysmd4Q8CC84 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms