Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gm20949-201ENSMUST00000206478 952 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gm46209-201ENSMUST00000217912 553 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.85□□□□□ -0.67
Tsen54Q8C2A2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms