Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm38158-201ENSMUST00000194617 339 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Thoc7-209ENSMUST00000225325 765 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Gm27501-201ENSMUST00000183599 107 ntBASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Gm18584-201ENSMUST00000203098 964 ntBASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Gm45331-201ENSMUST00000209868 554 ntBASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Gm6013-201ENSMUST00000212264 699 ntBASIC14.35□□□□□ -0.11
Trim47Q8C0E3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim47Q8C0E3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Gm12502-201ENSMUST00000120197 444 ntBASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.34□□□□□ -0.11
Trim47Q8C0E3 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms