Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne3Q8BT60 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne3Q8BT60 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Gm28631-201ENSMUST00000190740 334 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cpne3Q8BT60 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpne3Q8BT60 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms