Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm26315-201ENSMUST00000083890 321 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp2bQ8BJF9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2bQ8BJF9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm7730-201ENSMUST00000212486 454 ntBASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm5867-201ENSMUST00000063197 592 ntBASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2bQ8BJF9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms