Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Gm8463-201ENSMUST00000208573 613 ntBASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Gm17794-201ENSMUST00000220252 955 ntBASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn3Q8BHH8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm9002-201ENSMUST00000178437 499 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm19931-201ENSMUST00000198920 368 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm9908-201ENSMUST00000211534 448 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn3Q8BHH8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms